Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.3■□□□□ 0.36
Smarcc1P97496 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Smarcc1P97496 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC17.3■□□□□ 0.36
Smarcc1P97496 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC17.3■□□□□ 0.36
Smarcc1P97496 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC17.3■□□□□ 0.36
Smarcc1P97496 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC17.3■□□□□ 0.36
Smarcc1P97496 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 AC073947.2-201ENSMUST00000215888 1130 ntBASIC17.3■□□□□ 0.36
Smarcc1P97496 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.3■□□□□ 0.36
Smarcc1P97496 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Smarcc1P97496 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Smarcc1P97496 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Smarcc1P97496 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Smarcc1P97496 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc1P97496 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc1P97496 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc1P97496 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc1P97496 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc1P97496 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc1P97496 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc1P97496 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc1P97496 Gm13342-201ENSMUST00000121055 207 ntBASIC17.29■□□□□ 0.36
Smarcc1P97496 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smarcc1P97496 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC17.29■□□□□ 0.36
Smarcc1P97496 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC17.29■□□□□ 0.36
Smarcc1P97496 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Smarcc1P97496 Gm44364-201ENSMUST00000198368 141 ntBASIC17.29■□□□□ 0.36
Smarcc1P97496 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC17.29■□□□□ 0.36
Smarcc1P97496 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc1P97496 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc1P97496 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc1P97496 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.29■□□□□ 0.36
Smarcc1P97496 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc1P97496 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smarcc1P97496 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc1P97496 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smarcc1P97496 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Smarcc1P97496 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc1P97496 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc1P97496 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc1P97496 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc1P97496 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc1P97496 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Smarcc1P97496 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc1P97496 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Smarcc1P97496 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.28■□□□□ 0.36
Smarcc1P97496 Gm42627-201ENSMUST00000197347 224 ntBASIC17.28■□□□□ 0.36
Smarcc1P97496 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc1P97496 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.28■□□□□ 0.36
Smarcc1P97496 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc1P97496 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Smarcc1P97496 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smarcc1P97496 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc1P97496 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.28■□□□□ 0.36
Smarcc1P97496 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.28■□□□□ 0.36
Smarcc1P97496 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc1P97496 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc1P97496 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC17.28■□□□□ 0.36
Smarcc1P97496 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc1P97496 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Smarcc1P97496 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.27■□□□□ 0.36
Smarcc1P97496 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.27■□□□□ 0.36
Smarcc1P97496 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcc1P97496 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcc1P97496 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcc1P97496 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.27■□□□□ 0.36
Smarcc1P97496 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC17.27■□□□□ 0.36
Smarcc1P97496 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcc1P97496 Gm29608-201ENSMUST00000190444 463 ntBASIC17.27■□□□□ 0.36
Smarcc1P97496 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.27■□□□□ 0.36
Smarcc1P97496 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.27■□□□□ 0.36
Smarcc1P97496 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcc1P97496 Gm10268-201ENSMUST00000085340 555 ntBASIC17.27■□□□□ 0.36
Smarcc1P97496 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms