Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.8□□□□□ -0.36
Cacna1aP97445 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.8□□□□□ -0.36
Cacna1aP97445 Gm22331-201ENSMUST00000158066 136 ntBASIC12.8□□□□□ -0.36
Cacna1aP97445 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Gm38341-201ENSMUST00000195357 515 ntBASIC12.8□□□□□ -0.36
Cacna1aP97445 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.8□□□□□ -0.36
Cacna1aP97445 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cacna1aP97445 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.8□□□□□ -0.36
Cacna1aP97445 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.8□□□□□ -0.36
Cacna1aP97445 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.8□□□□□ -0.36
Cacna1aP97445 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.8□□□□□ -0.36
Cacna1aP97445 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Gm12384-201ENSMUST00000119228 919 ntBASIC12.79□□□□□ -0.36
Cacna1aP97445 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.79□□□□□ -0.36
Cacna1aP97445 Gm27772-201ENSMUST00000184900 187 ntBASIC12.79□□□□□ -0.36
Cacna1aP97445 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.79□□□□□ -0.36
Cacna1aP97445 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.79□□□□□ -0.36
Cacna1aP97445 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.79□□□□□ -0.36
Cacna1aP97445 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.79□□□□□ -0.36
Cacna1aP97445 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.79□□□□□ -0.36
Cacna1aP97445 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cacna1aP97445 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cacna1aP97445 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cacna1aP97445 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.79□□□□□ -0.36
Cacna1aP97445 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.79□□□□□ -0.36
Cacna1aP97445 Gm12997-201ENSMUST00000120207 640 ntBASIC12.79□□□□□ -0.36
Cacna1aP97445 Gm13385-201ENSMUST00000121089 220 ntBASIC12.79□□□□□ -0.36
Cacna1aP97445 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cacna1aP97445 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.79□□□□□ -0.36
Cacna1aP97445 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Gm43133-201ENSMUST00000197472 463 ntBASIC12.79□□□□□ -0.36
Cacna1aP97445 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.79□□□□□ -0.36
Cacna1aP97445 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.79□□□□□ -0.36
Cacna1aP97445 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Cacna1aP97445 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cacna1aP97445 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1aP97445 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Cacna1aP97445 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cacna1aP97445 Gm8213-201ENSMUST00000118191 441 ntBASIC12.78□□□□□ -0.36
Cacna1aP97445 Gm27331-201ENSMUST00000183705 60 ntBASIC12.78□□□□□ -0.36
Cacna1aP97445 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.78□□□□□ -0.36
Cacna1aP97445 Gm38002-201ENSMUST00000193255 180 ntBASIC12.78□□□□□ -0.36
Cacna1aP97445 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.78□□□□□ -0.36
Cacna1aP97445 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.78□□□□□ -0.36
Cacna1aP97445 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Cacna1aP97445 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Cacna1aP97445 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cacna1aP97445 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cacna1aP97445 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.78□□□□□ -0.36
Cacna1aP97445 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms