Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx2-3P97334 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx2-3P97334 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx2-3P97334 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx2-3P97334 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx2-3P97334 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Gm27516-201ENSMUST00000184237 98 ntBASIC17.33■□□□□ 0.36
Nkx2-3P97334 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Gm44064-201ENSMUST00000204964 1087 ntBASIC17.33■□□□□ 0.36
Nkx2-3P97334 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.33■□□□□ 0.36
Nkx2-3P97334 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-3P97334 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-3P97334 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC17.32■□□□□ 0.36
Nkx2-3P97334 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.32■□□□□ 0.36
Nkx2-3P97334 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC17.32■□□□□ 0.36
Nkx2-3P97334 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Gm5850-201ENSMUST00000192923 1206 ntBASIC17.32■□□□□ 0.36
Nkx2-3P97334 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Nkx2-3P97334 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.31■□□□□ 0.36
Nkx2-3P97334 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Gm38144-201ENSMUST00000192790 465 ntBASIC17.31■□□□□ 0.36
Nkx2-3P97334 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC17.31■□□□□ 0.36
Nkx2-3P97334 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms