Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.21□□□□□ -0.94
PrkdcP97313 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC9.21□□□□□ -0.94
PrkdcP97313 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC9.21□□□□□ -0.94
PrkdcP97313 Gm15897-201ENSMUST00000117770 1486 ntBASIC9.21□□□□□ -0.94
PrkdcP97313 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC9.21□□□□□ -0.94
PrkdcP97313 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
PrkdcP97313 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.21□□□□□ -0.94
PrkdcP97313 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
PrkdcP97313 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
PrkdcP97313 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PrkdcP97313 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Mir698-201ENSMUST00000102164 109 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.2□□□□□ -0.94
PrkdcP97313 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.2□□□□□ -0.94
PrkdcP97313 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC9.2□□□□□ -0.94
PrkdcP97313 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 Gm19287-201ENSMUST00000203190 358 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 Gm19640-201ENSMUST00000214849 464 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 AC113031.8-201ENSMUST00000227856 631 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.2□□□□□ -0.94
PrkdcP97313 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
PrkdcP97313 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
PrkdcP97313 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
PrkdcP97313 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
PrkdcP97313 Gm13034-201ENSMUST00000121342 3177 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 Gm43399-201ENSMUST00000202546 2374 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 Gm6159-201ENSMUST00000191249 1724 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Gm38157-201ENSMUST00000194178 1698 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 Gm11450-201ENSMUST00000121144 333 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC9.2□□□□□ -0.94
PrkdcP97313 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
PrkdcP97313 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.2□□□□□ -0.94
PrkdcP97313 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC9.2□□□□□ -0.94
PrkdcP97313 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Gm21811-201ENSMUST00000096485 930 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC9.2□□□□□ -0.94
PrkdcP97313 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.2□□□□□ -0.94
PrkdcP97313 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
PrkdcP97313 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 Gm23251-201ENSMUST00000103773 110 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 Gm9062-201ENSMUST00000117712 727 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 Gm7541-201ENSMUST00000118361 535 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC9.2□□□□□ -0.94
PrkdcP97313 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.2□□□□□ -0.94
PrkdcP97313 Gm43275-201ENSMUST00000202053 1020 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
PrkdcP97313 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.2□□□□□ -0.94
PrkdcP97313 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PrkdcP97313 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC9.19□□□□□ -0.94
PrkdcP97313 Gm45630-201ENSMUST00000210243 1911 ntBASIC9.19□□□□□ -0.94
PrkdcP97313 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
PrkdcP97313 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC9.19□□□□□ -0.94
PrkdcP97313 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC9.19□□□□□ -0.94
PrkdcP97313 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
PrkdcP97313 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.19□□□□□ -0.94
PrkdcP97313 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
PrkdcP97313 Gm8894-201ENSMUST00000074642 666 ntBASIC9.19□□□□□ -0.94
PrkdcP97313 Gm10179-201ENSMUST00000086233 688 ntBASIC9.19□□□□□ -0.94
PrkdcP97313 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC9.19□□□□□ -0.94
PrkdcP97313 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
PrkdcP97313 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms