Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.08■□□□□ 0
Trim43cP86449 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43cP86449 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43cP86449 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trim43cP86449 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.08■□□□□ 0
Trim43cP86449 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43cP86449 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43cP86449 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.08■□□□□ 0
Trim43cP86449 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43cP86449 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.08■□□□□ 0
Trim43cP86449 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43cP86449 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43cP86449 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trim43cP86449 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim43cP86449 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43cP86449 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43cP86449 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43cP86449 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim43cP86449 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Gm9522-201ENSMUST00000182394 926 ntBASIC15.07■□□□□ 0
Trim43cP86449 Mir7684-201ENSMUST00000183858 60 ntBASIC15.07■□□□□ 0
Trim43cP86449 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.07■□□□□ 0
Trim43cP86449 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trim43cP86449 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Trim43cP86449 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.07■□□□□ 0
Trim43cP86449 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.07■□□□□ 0
Trim43cP86449 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trim43cP86449 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43cP86449 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43cP86449 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim43cP86449 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim43cP86449 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.06■□□□□ 0
Trim43cP86449 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.06■□□□□ 0
Trim43cP86449 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43cP86449 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.06■□□□□ 0
Trim43cP86449 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43cP86449 Gm22189-201ENSMUST00000103822 86 ntBASIC15.06■□□□□ 0
Trim43cP86449 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.06■□□□□ 0
Trim43cP86449 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim43cP86449 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim43cP86449 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43cP86449 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trim43cP86449 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trim43cP86449 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43cP86449 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trim43cP86449 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43cP86449 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Trim43cP86449 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim43cP86449 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43cP86449 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.06■□□□□ 0
Trim43cP86449 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43cP86449 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trim43cP86449 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.06■□□□□ 0
Trim43cP86449 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43cP86449 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim43cP86449 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43cP86449 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43cP86449 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Trim43cP86449 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim43cP86449 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.05■□□□□ 0
Trim43cP86449 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.05■□□□□ 0
Trim43cP86449 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim43cP86449 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim43cP86449 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim43cP86449 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim43cP86449 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim43cP86449 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trim43cP86449 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim43cP86449 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim43cP86449 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim43cP86449 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43cP86449 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Trim43cP86449 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim43cP86449 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim43cP86449 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.05■□□□□ -0
Trim43cP86449 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Trim43cP86449 Auts2-212ENSMUST00000178555 309 ntBASIC15.05■□□□□ -0
Trim43cP86449 Gm27838-201ENSMUST00000184829 128 ntBASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms