Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra8P70278 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Stra8P70278 Gm18057-201ENSMUST00000208220 503 ntBASIC19.19■□□□□ 0.66
Stra8P70278 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.19■□□□□ 0.66
Stra8P70278 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC19.19■□□□□ 0.66
Stra8P70278 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra8P70278 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra8P70278 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra8P70278 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra8P70278 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra8P70278 AC121805.2-201ENSMUST00000218808 2538 ntBASIC19.19■□□□□ 0.66
Stra8P70278 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra8P70278 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra8P70278 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra8P70278 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra8P70278 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra8P70278 AC126549.2-201ENSMUST00000223997 1976 ntBASIC19.19■□□□□ 0.66
Stra8P70278 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra8P70278 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Stra8P70278 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Stra8P70278 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra8P70278 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra8P70278 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Stra8P70278 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Stra8P70278 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 AC155298.2-201ENSMUST00000225485 6226 ntBASIC19.18■□□□□ 0.66
Stra8P70278 Ankra2-208ENSMUST00000226100 1476 ntBASIC19.18■□□□□ 0.66
Stra8P70278 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Stra8P70278 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC19.18■□□□□ 0.66
Stra8P70278 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Stra8P70278 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.18■□□□□ 0.66
Stra8P70278 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Stra8P70278 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.18■□□□□ 0.66
Stra8P70278 Gm43364-201ENSMUST00000196046 3274 ntBASIC19.18■□□□□ 0.66
Stra8P70278 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC19.18■□□□□ 0.66
Stra8P70278 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra8P70278 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Stra8P70278 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Stra8P70278 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra8P70278 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra8P70278 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra8P70278 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra8P70278 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra8P70278 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Stra8P70278 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Stra8P70278 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Stra8P70278 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Stra8P70278 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Stra8P70278 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC19.17■□□□□ 0.66
Stra8P70278 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Stra8P70278 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.17■□□□□ 0.66
Stra8P70278 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Stra8P70278 AC139054.1-201ENSMUST00000226898 1598 ntBASIC19.17■□□□□ 0.66
Stra8P70278 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Stra8P70278 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra8P70278 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Stra8P70278 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra8P70278 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra8P70278 Gm9109-201ENSMUST00000120254 1405 ntBASIC19.17■□□□□ 0.66
Stra8P70278 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Stra8P70278 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra8P70278 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC19.16■□□□□ 0.66
Stra8P70278 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Stra8P70278 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Stra8P70278 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra8P70278 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra8P70278 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra8P70278 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra8P70278 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19.16■□□□□ 0.66
Stra8P70278 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.16■□□□□ 0.66
Stra8P70278 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Stra8P70278 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Stra8P70278 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Stra8P70278 Gm5479-201ENSMUST00000160578 435 ntBASIC19.16■□□□□ 0.66
Stra8P70278 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC19.16■□□□□ 0.66
Stra8P70278 Gm44335-201ENSMUST00000196879 141 ntBASIC19.16■□□□□ 0.66
Stra8P70278 Gm44297-201ENSMUST00000198304 141 ntBASIC19.16■□□□□ 0.66
Stra8P70278 Gm44346-201ENSMUST00000198851 141 ntBASIC19.16■□□□□ 0.66
Stra8P70278 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.16■□□□□ 0.66
Stra8P70278 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra8P70278 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms