Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.59□□□□□ -0.55
Pdlim4P70271 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.59□□□□□ -0.55
Pdlim4P70271 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pdlim4P70271 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pdlim4P70271 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pdlim4P70271 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pdlim4P70271 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pdlim4P70271 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pdlim4P70271 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pdlim4P70271 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Pdlim4P70271 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.59□□□□□ -0.55
Pdlim4P70271 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Pdlim4P70271 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Pdlim4P70271 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Pdlim4P70271 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.58□□□□□ -0.56
Pdlim4P70271 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pdlim4P70271 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pdlim4P70271 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
Pdlim4P70271 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Pdlim4P70271 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Pdlim4P70271 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Gm13223-201ENSMUST00000118609 747 ntBASIC11.58□□□□□ -0.56
Pdlim4P70271 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.58□□□□□ -0.56
Pdlim4P70271 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.58□□□□□ -0.56
Pdlim4P70271 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.58□□□□□ -0.56
Pdlim4P70271 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.58□□□□□ -0.56
Pdlim4P70271 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.58□□□□□ -0.56
Pdlim4P70271 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Pdlim4P70271 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.58□□□□□ -0.56
Pdlim4P70271 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.58□□□□□ -0.56
Pdlim4P70271 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pdlim4P70271 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Pdlim4P70271 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim4P70271 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.58□□□□□ -0.56
Pdlim4P70271 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.57□□□□□ -0.56
Pdlim4P70271 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.57□□□□□ -0.56
Pdlim4P70271 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.57□□□□□ -0.56
Pdlim4P70271 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pdlim4P70271 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pdlim4P70271 Gm10576-201ENSMUST00000191927 825 ntBASIC11.57□□□□□ -0.56
Pdlim4P70271 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.57□□□□□ -0.56
Pdlim4P70271 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms