Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lmo4P61969 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Lmo4P61969 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lmo4P61969 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Lmo4P61969 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lmo4P61969 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lmo4P61969 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lmo4P61969 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.19□□□□□ -0.62
Lmo4P61969 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lmo4P61969 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.19□□□□□ -0.62
Lmo4P61969 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lmo4P61969 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Lmo4P61969 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Lmo4P61969 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Lmo4P61969 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Lmo4P61969 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.18□□□□□ -0.62
Lmo4P61969 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.18□□□□□ -0.62
Lmo4P61969 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.18□□□□□ -0.62
Lmo4P61969 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.18□□□□□ -0.62
Lmo4P61969 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Lmo4P61969 Gm24196-201ENSMUST00000179161 110 ntBASIC11.18□□□□□ -0.62
Lmo4P61969 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Gm45784-201ENSMUST00000188360 142 ntBASIC11.18□□□□□ -0.62
Lmo4P61969 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.18□□□□□ -0.62
Lmo4P61969 Gm17330-201ENSMUST00000221047 165 ntBASIC11.18□□□□□ -0.62
Lmo4P61969 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.18□□□□□ -0.62
Lmo4P61969 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.18□□□□□ -0.62
Lmo4P61969 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Lmo4P61969 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Lmo4P61969 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.18□□□□□ -0.62
Lmo4P61969 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lmo4P61969 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.17□□□□□ -0.62
Lmo4P61969 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Lmo4P61969 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Lmo4P61969 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Lmo4P61969 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Lmo4P61969 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.17□□□□□ -0.62
Lmo4P61969 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Gm12742-201ENSMUST00000117326 410 ntBASIC11.17□□□□□ -0.62
Lmo4P61969 Gm15770-201ENSMUST00000117498 584 ntBASIC11.17□□□□□ -0.62
Lmo4P61969 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.17□□□□□ -0.62
Lmo4P61969 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.17□□□□□ -0.62
Lmo4P61969 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.17□□□□□ -0.62
Lmo4P61969 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.17□□□□□ -0.62
Lmo4P61969 Gm29127-201ENSMUST00000188304 517 ntBASIC11.17□□□□□ -0.62
Lmo4P61969 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.17□□□□□ -0.62
Lmo4P61969 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Lmo4P61969 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Lmo4P61969 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Lmo4P61969 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms