Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sox1P53783 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.11□□□□□ -0.15
Sox1P53783 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.11□□□□□ -0.15
Sox1P53783 Gm9083-201ENSMUST00000120423 819 ntBASIC14.11□□□□□ -0.15
Sox1P53783 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.11□□□□□ -0.15
Sox1P53783 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.11□□□□□ -0.15
Sox1P53783 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.11□□□□□ -0.15
Sox1P53783 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.11□□□□□ -0.15
Sox1P53783 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.11□□□□□ -0.15
Sox1P53783 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.11□□□□□ -0.15
Sox1P53783 Gm18584-201ENSMUST00000203098 964 ntBASIC14.11□□□□□ -0.15
Sox1P53783 Gm44545-201ENSMUST00000208262 746 ntBASIC14.11□□□□□ -0.15
Sox1P53783 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.11□□□□□ -0.15
Sox1P53783 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Itm2b-204ENSMUST00000228637 783 ntBASIC14.11□□□□□ -0.15
Sox1P53783 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox1P53783 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox1P53783 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sox1P53783 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.1□□□□□ -0.15
Sox1P53783 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.1□□□□□ -0.15
Sox1P53783 Gm11591-201ENSMUST00000120063 702 ntBASIC14.1□□□□□ -0.15
Sox1P53783 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.1□□□□□ -0.15
Sox1P53783 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC14.1□□□□□ -0.15
Sox1P53783 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.1□□□□□ -0.15
Sox1P53783 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.1□□□□□ -0.15
Sox1P53783 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.1□□□□□ -0.15
Sox1P53783 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.1□□□□□ -0.15
Sox1P53783 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sox1P53783 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.1□□□□□ -0.15
Sox1P53783 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.1□□□□□ -0.15
Sox1P53783 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox1P53783 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Sox1P53783 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.09□□□□□ -0.15
Sox1P53783 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.09□□□□□ -0.15
Sox1P53783 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.09□□□□□ -0.15
Sox1P53783 Gm14208-201ENSMUST00000119645 678 ntBASIC14.09□□□□□ -0.15
Sox1P53783 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.09□□□□□ -0.15
Sox1P53783 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms