Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.39□□□□□ -0.27
Lbx1P52955 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.38□□□□□ -0.27
Lbx1P52955 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.38□□□□□ -0.27
Lbx1P52955 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Lbx1P52955 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.38□□□□□ -0.27
Lbx1P52955 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.38□□□□□ -0.27
Lbx1P52955 Gm14208-201ENSMUST00000119645 678 ntBASIC13.38□□□□□ -0.27
Lbx1P52955 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.38□□□□□ -0.27
Lbx1P52955 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.38□□□□□ -0.27
Lbx1P52955 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lbx1P52955 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.38□□□□□ -0.27
Lbx1P52955 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Lbx1P52955 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Gm44967-201ENSMUST00000207047 631 ntBASIC13.38□□□□□ -0.27
Lbx1P52955 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.38□□□□□ -0.27
Lbx1P52955 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.38□□□□□ -0.27
Lbx1P52955 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lbx1P52955 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Lbx1P52955 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lbx1P52955 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.37□□□□□ -0.27
Lbx1P52955 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Lbx1P52955 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Lbx1P52955 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.37□□□□□ -0.27
Lbx1P52955 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Lbx1P52955 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Lbx1P52955 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lbx1P52955 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.37□□□□□ -0.27
Lbx1P52955 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.37□□□□□ -0.27
Lbx1P52955 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.37□□□□□ -0.27
Lbx1P52955 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.37□□□□□ -0.27
Lbx1P52955 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Morn2-202ENSMUST00000227729 656 ntBASIC13.37□□□□□ -0.27
Lbx1P52955 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.37□□□□□ -0.27
Lbx1P52955 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.37□□□□□ -0.27
Lbx1P52955 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Lbx1P52955 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.37□□□□□ -0.27
Lbx1P52955 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lbx1P52955 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lbx1P52955 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lbx1P52955 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lbx1P52955 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.36□□□□□ -0.27
Lbx1P52955 Celf4-206ENSMUST00000224553 1729 ntBASIC13.36□□□□□ -0.27
Lbx1P52955 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lbx1P52955 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lbx1P52955 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lbx1P52955 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lbx1P52955 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lbx1P52955 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lbx1P52955 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lbx1P52955 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.36□□□□□ -0.27
Lbx1P52955 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms