Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.3■□□□□ 0.04
Brca1P48754 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.3■□□□□ 0.04
Brca1P48754 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.29■□□□□ 0.04
Brca1P48754 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.29■□□□□ 0.04
Brca1P48754 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC15.29■□□□□ 0.04
Brca1P48754 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.29■□□□□ 0.04
Brca1P48754 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.29■□□□□ 0.04
Brca1P48754 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.29■□□□□ 0.04
Brca1P48754 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.29■□□□□ 0.04
Brca1P48754 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Brca1P48754 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.29■□□□□ 0.04
Brca1P48754 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.29■□□□□ 0.04
Brca1P48754 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Brca1P48754 Gm37042-201ENSMUST00000193816 581 ntBASIC15.29■□□□□ 0.04
Brca1P48754 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.29■□□□□ 0.04
Brca1P48754 Gm44069-201ENSMUST00000204898 506 ntBASIC15.29■□□□□ 0.04
Brca1P48754 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.29■□□□□ 0.04
Brca1P48754 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brca1P48754 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brca1P48754 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brca1P48754 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Brca1P48754 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Brca1P48754 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brca1P48754 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brca1P48754 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brca1P48754 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brca1P48754 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brca1P48754 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Brca1P48754 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Brca1P48754 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Brca1P48754 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC15.28■□□□□ 0.04
Brca1P48754 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.28■□□□□ 0.04
Brca1P48754 Morn2-202ENSMUST00000227729 656 ntBASIC15.28■□□□□ 0.04
Brca1P48754 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brca1P48754 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Brca1P48754 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brca1P48754 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brca1P48754 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Brca1P48754 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.28■□□□□ 0.04
Brca1P48754 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brca1P48754 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brca1P48754 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brca1P48754 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Brca1P48754 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brca1P48754 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brca1P48754 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Brca1P48754 Gm24514-201ENSMUST00000174961 285 ntBASIC15.27■□□□□ 0.04
Brca1P48754 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brca1P48754 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brca1P48754 Gm30285-201ENSMUST00000214614 422 ntBASIC15.27■□□□□ 0.04
Brca1P48754 Gm10702-201ENSMUST00000098929 1268 ntBASIC15.27■□□□□ 0.04
Brca1P48754 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brca1P48754 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brca1P48754 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Brca1P48754 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Brca1P48754 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brca1P48754 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brca1P48754 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Brca1P48754 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.27■□□□□ 0.03
Brca1P48754 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brca1P48754 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brca1P48754 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.27■□□□□ 0.03
Brca1P48754 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brca1P48754 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brca1P48754 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brca1P48754 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Brca1P48754 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brca1P48754 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brca1P48754 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brca1P48754 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brca1P48754 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Brca1P48754 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brca1P48754 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brca1P48754 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Brca1P48754 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.27■□□□□ 0.03
Brca1P48754 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brca1P48754 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms