Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.33□□□□□ -0.28
Sox18P43680 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.33□□□□□ -0.28
Sox18P43680 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.33□□□□□ -0.28
Sox18P43680 Gm27516-201ENSMUST00000184237 98 ntBASIC13.33□□□□□ -0.28
Sox18P43680 Gm29013-201ENSMUST00000187431 237 ntBASIC13.33□□□□□ -0.28
Sox18P43680 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.33□□□□□ -0.28
Sox18P43680 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sox18P43680 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.33□□□□□ -0.28
Sox18P43680 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Sox18P43680 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.32□□□□□ -0.28
Sox18P43680 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.32□□□□□ -0.28
Sox18P43680 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox18P43680 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Sox18P43680 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox18P43680 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sox18P43680 Gm10275-202ENSMUST00000168697 495 ntBASIC13.32□□□□□ -0.28
Sox18P43680 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.32□□□□□ -0.28
Sox18P43680 Gm27501-201ENSMUST00000183599 107 ntBASIC13.32□□□□□ -0.28
Sox18P43680 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox18P43680 Gm38002-201ENSMUST00000193255 180 ntBASIC13.32□□□□□ -0.28
Sox18P43680 Gm43094-201ENSMUST00000196549 921 ntBASIC13.32□□□□□ -0.28
Sox18P43680 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox18P43680 Gm44364-201ENSMUST00000198368 141 ntBASIC13.32□□□□□ -0.28
Sox18P43680 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.32□□□□□ -0.28
Sox18P43680 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC13.32□□□□□ -0.28
Sox18P43680 Gm45930-201ENSMUST00000221330 292 ntBASIC13.32□□□□□ -0.28
Sox18P43680 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sox18P43680 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Gm10275-201ENSMUST00000092620 635 ntBASIC13.32□□□□□ -0.28
Sox18P43680 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox18P43680 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox18P43680 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox18P43680 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.31□□□□□ -0.28
Sox18P43680 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sox18P43680 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Gm18719-201ENSMUST00000196696 1413 ntBASIC13.31□□□□□ -0.28
Sox18P43680 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Sox18P43680 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.31□□□□□ -0.28
Sox18P43680 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Sox18P43680 Gm16177-201ENSMUST00000120728 718 ntBASIC13.31□□□□□ -0.28
Sox18P43680 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.31□□□□□ -0.28
Sox18P43680 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms