Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Hmx3P42581 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Hmx3P42581 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.64□□□□□ -0.55
Hmx3P42581 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.64□□□□□ -0.55
Hmx3P42581 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.64□□□□□ -0.55
Hmx3P42581 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Gm7461-201ENSMUST00000058918 827 ntBASIC11.64□□□□□ -0.55
Hmx3P42581 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Hmx3P42581 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.64□□□□□ -0.55
Hmx3P42581 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmx3P42581 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.64□□□□□ -0.55
Hmx3P42581 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Hmx3P42581 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.63□□□□□ -0.55
Hmx3P42581 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Hmx3P42581 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Hmx3P42581 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Hmx3P42581 Gm2651-201ENSMUST00000203560 838 ntBASIC11.63□□□□□ -0.55
Hmx3P42581 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.63□□□□□ -0.55
Hmx3P42581 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.63□□□□□ -0.55
Hmx3P42581 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.63□□□□□ -0.55
Hmx3P42581 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Hmx3P42581 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.63□□□□□ -0.55
Hmx3P42581 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Hmx3P42581 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.63□□□□□ -0.55
Hmx3P42581 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hmx3P42581 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.62□□□□□ -0.55
Hmx3P42581 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Hmx3P42581 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Hmx3P42581 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.62□□□□□ -0.55
Hmx3P42581 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.62□□□□□ -0.55
Hmx3P42581 Gm12350-201ENSMUST00000121208 462 ntBASIC11.62□□□□□ -0.55
Hmx3P42581 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.62□□□□□ -0.55
Hmx3P42581 Gm27300-201ENSMUST00000184085 97 ntBASIC11.62□□□□□ -0.55
Hmx3P42581 Gm27335-201ENSMUST00000184758 97 ntBASIC11.62□□□□□ -0.55
Hmx3P42581 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Mzt1-203ENSMUST00000227948 952 ntBASIC11.62□□□□□ -0.55
Hmx3P42581 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms