Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.57□□□□□ -0.56
Abca1P41233 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Abca1P41233 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.56□□□□□ -0.56
Abca1P41233 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.56□□□□□ -0.56
Abca1P41233 Gm8062-201ENSMUST00000139696 444 ntBASIC11.56□□□□□ -0.56
Abca1P41233 Gm17420-201ENSMUST00000164753 153 ntBASIC11.56□□□□□ -0.56
Abca1P41233 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.56□□□□□ -0.56
Abca1P41233 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Abca1P41233 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Abca1P41233 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Abca1P41233 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.56□□□□□ -0.56
Abca1P41233 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.56□□□□□ -0.56
Abca1P41233 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.56□□□□□ -0.56
Abca1P41233 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Abca1P41233 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Abca1P41233 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Abca1P41233 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Abca1P41233 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.55□□□□□ -0.56
Abca1P41233 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Abca1P41233 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
Abca1P41233 Gm6244-201ENSMUST00000178732 841 ntBASIC11.55□□□□□ -0.56
Abca1P41233 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.55□□□□□ -0.56
Abca1P41233 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.55□□□□□ -0.56
Abca1P41233 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Abca1P41233 Gm10478-201ENSMUST00000084451 396 ntBASIC11.55□□□□□ -0.56
Abca1P41233 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.55□□□□□ -0.56
Abca1P41233 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Abca1P41233 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Abca1P41233 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Abca1P41233 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Abca1P41233 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Abca1P41233 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.55□□□□□ -0.56
Abca1P41233 Snora78-201ENSMUST00000158630 128 ntBASIC11.55□□□□□ -0.56
Abca1P41233 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.55□□□□□ -0.56
Abca1P41233 Mir7654-201ENSMUST00000185082 70 ntBASIC11.55□□□□□ -0.56
Abca1P41233 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.55□□□□□ -0.56
Abca1P41233 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.55□□□□□ -0.56
Abca1P41233 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.55□□□□□ -0.56
Abca1P41233 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Abca1P41233 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Abca1P41233 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Abca1P41233 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Abca1P41233 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms