Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.06□□□□□ -0.32
Sox6P40645 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sox6P40645 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sox6P40645 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Sox6P40645 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Sox6P40645 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Sox6P40645 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.05□□□□□ -0.32
Sox6P40645 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Gm26308-201ENSMUST00000157768 69 ntBASIC13.05□□□□□ -0.32
Sox6P40645 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.05□□□□□ -0.32
Sox6P40645 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.05□□□□□ -0.32
Sox6P40645 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.05□□□□□ -0.32
Sox6P40645 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.05□□□□□ -0.32
Sox6P40645 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.05□□□□□ -0.32
Sox6P40645 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Sox6P40645 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Sox6P40645 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.05□□□□□ -0.32
Sox6P40645 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.05□□□□□ -0.32
Sox6P40645 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox6P40645 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.05□□□□□ -0.32
Sox6P40645 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sox6P40645 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sox6P40645 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox6P40645 Gm2810-201ENSMUST00000118681 990 ntBASIC13.04□□□□□ -0.32
Sox6P40645 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Sox6P40645 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox6P40645 Gm38225-201ENSMUST00000194001 393 ntBASIC13.04□□□□□ -0.32
Sox6P40645 Olfr286-202ENSMUST00000205305 969 ntBASIC13.04□□□□□ -0.32
Sox6P40645 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox6P40645 Chchd1-203ENSMUST00000224633 557 ntBASIC13.04□□□□□ -0.32
Sox6P40645 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.04□□□□□ -0.32
Sox6P40645 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sox6P40645 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Sox6P40645 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox6P40645 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms