Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh4P39038 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh4P39038 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh4P39038 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.31□□□□□ -0.28
Cdh4P39038 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh4P39038 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh4P39038 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh4P39038 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cdh4P39038 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.31□□□□□ -0.28
Cdh4P39038 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh4P39038 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh4P39038 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cdh4P39038 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh4P39038 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh4P39038 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh4P39038 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdh4P39038 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdh4P39038 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdh4P39038 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdh4P39038 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Cdh4P39038 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.3□□□□□ -0.28
Cdh4P39038 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.3□□□□□ -0.28
Cdh4P39038 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cdh4P39038 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdh4P39038 Gm5425-201ENSMUST00000214125 459 ntBASIC13.3□□□□□ -0.28
Cdh4P39038 Gm20445-201ENSMUST00000061905 565 ntBASIC13.3□□□□□ -0.28
Cdh4P39038 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdh4P39038 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Syt7-204ENSMUST00000223586 1344 ntBASIC13.3□□□□□ -0.28
Cdh4P39038 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.3□□□□□ -0.28
Cdh4P39038 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdh4P39038 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdh4P39038 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh4P39038 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cdh4P39038 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cdh4P39038 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdh4P39038 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cdh4P39038 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cdh4P39038 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdh4P39038 Gm24694-201ENSMUST00000180054 110 ntBASIC13.29□□□□□ -0.28
Cdh4P39038 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Gm27663-201ENSMUST00000184839 110 ntBASIC13.29□□□□□ -0.28
Cdh4P39038 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Gm29667-201ENSMUST00000190817 490 ntBASIC13.29□□□□□ -0.28
Cdh4P39038 Gm10766-202ENSMUST00000194123 606 ntBASIC13.29□□□□□ -0.28
Cdh4P39038 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.29□□□□□ -0.28
Cdh4P39038 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.29□□□□□ -0.28
Cdh4P39038 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.29□□□□□ -0.28
Cdh4P39038 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.29□□□□□ -0.28
Cdh4P39038 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cdh4P39038 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cdh4P39038 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
Cdh4P39038 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh4P39038 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Cdh4P39038 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cdh4P39038 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cdh4P39038 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Cdh4P39038 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms