Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfc1P35601 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.64□□□□□ -0.07
Rfc1P35601 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfc1P35601 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfc1P35601 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Rfc1P35601 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfc1P35601 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Rfc1P35601 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Rfc1P35601 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.63□□□□□ -0.07
Rfc1P35601 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Rfc1P35601 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.63□□□□□ -0.07
Rfc1P35601 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.63□□□□□ -0.07
Rfc1P35601 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Rfc1P35601 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Rfc1P35601 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.63□□□□□ -0.07
Rfc1P35601 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.63□□□□□ -0.07
Rfc1P35601 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfc1P35601 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.63□□□□□ -0.07
Rfc1P35601 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.62□□□□□ -0.07
Rfc1P35601 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.62□□□□□ -0.07
Rfc1P35601 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rfc1P35601 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rfc1P35601 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.62□□□□□ -0.07
Rfc1P35601 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.62□□□□□ -0.07
Rfc1P35601 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.62□□□□□ -0.07
Rfc1P35601 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rfc1P35601 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.62□□□□□ -0.07
Rfc1P35601 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.62□□□□□ -0.07
Rfc1P35601 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfc1P35601 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rfc1P35601 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rfc1P35601 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rfc1P35601 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rfc1P35601 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfc1P35601 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Rfc1P35601 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Rfc1P35601 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfc1P35601 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Rfc1P35601 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfc1P35601 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rfc1P35601 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfc1P35601 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Rfc1P35601 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfc1P35601 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Rfc1P35601 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfc1P35601 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rfc1P35601 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.61□□□□□ -0.07
Rfc1P35601 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rfc1P35601 Gm2651-201ENSMUST00000203560 838 ntBASIC14.61□□□□□ -0.07
Rfc1P35601 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfc1P35601 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfc1P35601 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms