Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Foxa1P35582 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxa1P35582 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Foxa1P35582 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxa1P35582 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxa1P35582 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxa1P35582 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Foxa1P35582 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.84□□□□□ -0.35
Foxa1P35582 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.84□□□□□ -0.35
Foxa1P35582 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Foxa1P35582 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Foxa1P35582 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.84□□□□□ -0.35
Foxa1P35582 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Foxa1P35582 Gm14719-201ENSMUST00000121891 340 ntBASIC12.84□□□□□ -0.35
Foxa1P35582 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.84□□□□□ -0.35
Foxa1P35582 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.84□□□□□ -0.35
Foxa1P35582 Gm9522-201ENSMUST00000182394 926 ntBASIC12.84□□□□□ -0.35
Foxa1P35582 Gm27838-201ENSMUST00000184829 128 ntBASIC12.84□□□□□ -0.35
Foxa1P35582 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.84□□□□□ -0.35
Foxa1P35582 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.84□□□□□ -0.35
Foxa1P35582 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.84□□□□□ -0.35
Foxa1P35582 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Foxa1P35582 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.84□□□□□ -0.35
Foxa1P35582 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Foxa1P35582 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Foxa1P35582 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxa1P35582 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Foxa1P35582 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Foxa1P35582 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Foxa1P35582 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Foxa1P35582 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Foxa1P35582 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.83□□□□□ -0.35
Foxa1P35582 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Foxa1P35582 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Foxa1P35582 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Foxa1P35582 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Foxa1P35582 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Foxa1P35582 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.83□□□□□ -0.36
Foxa1P35582 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.83□□□□□ -0.36
Foxa1P35582 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.83□□□□□ -0.36
Foxa1P35582 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Foxa1P35582 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.83□□□□□ -0.36
Foxa1P35582 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Foxa1P35582 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Gm8927-201ENSMUST00000181978 981 ntBASIC12.83□□□□□ -0.36
Foxa1P35582 Gm29667-201ENSMUST00000190817 490 ntBASIC12.83□□□□□ -0.36
Foxa1P35582 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.83□□□□□ -0.36
Foxa1P35582 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.83□□□□□ -0.36
Foxa1P35582 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.83□□□□□ -0.36
Foxa1P35582 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Foxa1P35582 Gm3222-201ENSMUST00000071282 990 ntBASIC12.83□□□□□ -0.36
Foxa1P35582 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxa1P35582 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms