Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.6□□□□□ -0.39
VtnP29788 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VtnP29788 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VtnP29788 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.6□□□□□ -0.39
VtnP29788 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VtnP29788 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VtnP29788 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
VtnP29788 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.6□□□□□ -0.39
VtnP29788 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
VtnP29788 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
VtnP29788 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
VtnP29788 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.59□□□□□ -0.39
VtnP29788 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.59□□□□□ -0.39
VtnP29788 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
VtnP29788 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
VtnP29788 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.59□□□□□ -0.39
VtnP29788 Gm21470-201ENSMUST00000187680 696 ntBASIC12.59□□□□□ -0.39
VtnP29788 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.59□□□□□ -0.39
VtnP29788 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
VtnP29788 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.59□□□□□ -0.39
VtnP29788 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.59□□□□□ -0.39
VtnP29788 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
VtnP29788 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.59□□□□□ -0.39
VtnP29788 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
VtnP29788 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.59□□□□□ -0.39
VtnP29788 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VtnP29788 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
VtnP29788 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
VtnP29788 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
VtnP29788 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.58□□□□□ -0.4
VtnP29788 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.58□□□□□ -0.4
VtnP29788 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.58□□□□□ -0.4
VtnP29788 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
VtnP29788 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.58□□□□□ -0.4
VtnP29788 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
VtnP29788 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.58□□□□□ -0.4
VtnP29788 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.58□□□□□ -0.4
VtnP29788 Gm7653-201ENSMUST00000214567 508 ntBASIC12.58□□□□□ -0.4
VtnP29788 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.58□□□□□ -0.4
VtnP29788 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
VtnP29788 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.58□□□□□ -0.4
VtnP29788 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
VtnP29788 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
VtnP29788 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.58□□□□□ -0.4
VtnP29788 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.58□□□□□ -0.4
VtnP29788 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VtnP29788 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VtnP29788 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VtnP29788 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
VtnP29788 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
VtnP29788 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VtnP29788 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VtnP29788 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VtnP29788 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 140.8 ms