Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Col8a2P25318 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Col8a2P25318 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Col8a2P25318 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Col8a2P25318 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.59□□□□□ -0.55
Col8a2P25318 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.59□□□□□ -0.55
Col8a2P25318 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.58□□□□□ -0.55
Col8a2P25318 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Col8a2P25318 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Col8a2P25318 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.58□□□□□ -0.56
Col8a2P25318 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.58□□□□□ -0.56
Col8a2P25318 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Col8a2P25318 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Gm43094-201ENSMUST00000196549 921 ntBASIC11.58□□□□□ -0.56
Col8a2P25318 Gm5279-201ENSMUST00000199575 745 ntBASIC11.58□□□□□ -0.56
Col8a2P25318 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.58□□□□□ -0.56
Col8a2P25318 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.58□□□□□ -0.56
Col8a2P25318 Gm45384-201ENSMUST00000210451 277 ntBASIC11.58□□□□□ -0.56
Col8a2P25318 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.58□□□□□ -0.56
Col8a2P25318 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col8a2P25318 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.58□□□□□ -0.56
Col8a2P25318 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col8a2P25318 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Col8a2P25318 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.58□□□□□ -0.56
Col8a2P25318 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.58□□□□□ -0.56
Col8a2P25318 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a2P25318 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.57□□□□□ -0.56
Col8a2P25318 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Col8a2P25318 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Col8a2P25318 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Col8a2P25318 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.57□□□□□ -0.56
Col8a2P25318 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col8a2P25318 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.57□□□□□ -0.56
Col8a2P25318 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Col8a2P25318 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.57□□□□□ -0.56
Col8a2P25318 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.57□□□□□ -0.56
Col8a2P25318 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.57□□□□□ -0.56
Col8a2P25318 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.57□□□□□ -0.56
Col8a2P25318 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Col8a2P25318 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col8a2P25318 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms