Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Clk1P22518 Gm15693-201ENSMUST00000120470 637 ntBASIC13□□□□□ -0.33
Clk1P22518 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13□□□□□ -0.33
Clk1P22518 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Clk1P22518 Gm24245-201ENSMUST00000157318 57 ntBASIC13□□□□□ -0.33
Clk1P22518 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13□□□□□ -0.33
Clk1P22518 Gm43575-201ENSMUST00000196420 516 ntBASIC13□□□□□ -0.33
Clk1P22518 Gm44608-201ENSMUST00000206827 855 ntBASIC13□□□□□ -0.33
Clk1P22518 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13□□□□□ -0.33
Clk1P22518 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13□□□□□ -0.33
Clk1P22518 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13□□□□□ -0.33
Clk1P22518 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13□□□□□ -0.33
Clk1P22518 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Gm37542-201ENSMUST00000192563 2832 ntBASIC13□□□□□ -0.33
Clk1P22518 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Clk1P22518 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Clk1P22518 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Clk1P22518 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Gm43205-201ENSMUST00000198622 1968 ntBASIC13□□□□□ -0.33
Clk1P22518 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Clk1P22518 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.99□□□□□ -0.33
Clk1P22518 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.99□□□□□ -0.33
Clk1P22518 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.99□□□□□ -0.33
Clk1P22518 Gm5566-201ENSMUST00000116118 459 ntBASIC12.99□□□□□ -0.33
Clk1P22518 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Clk1P22518 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Clk1P22518 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clk1P22518 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Clk1P22518 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.99□□□□□ -0.33
Clk1P22518 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.98□□□□□ -0.33
Clk1P22518 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.98□□□□□ -0.33
Clk1P22518 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.98□□□□□ -0.33
Clk1P22518 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clk1P22518 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.98□□□□□ -0.33
Clk1P22518 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Clk1P22518 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.98□□□□□ -0.33
Clk1P22518 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.98□□□□□ -0.33
Clk1P22518 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clk1P22518 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clk1P22518 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Clk1P22518 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.98□□□□□ -0.33
Clk1P22518 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clk1P22518 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.98□□□□□ -0.33
Clk1P22518 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Clk1P22518 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Clk1P22518 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.97□□□□□ -0.33
Clk1P22518 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms