Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cdx1P18111 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cdx1P18111 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Cdx1P18111 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cdx1P18111 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdx1P18111 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdx1P18111 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.24□□□□□ -0.61
Cdx1P18111 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.24□□□□□ -0.61
Cdx1P18111 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdx1P18111 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.24□□□□□ -0.61
Cdx1P18111 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdx1P18111 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.24□□□□□ -0.61
Cdx1P18111 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.24□□□□□ -0.61
Cdx1P18111 Gm19164-201ENSMUST00000210667 640 ntBASIC11.24□□□□□ -0.61
Cdx1P18111 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.24□□□□□ -0.61
Cdx1P18111 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.24□□□□□ -0.61
Cdx1P18111 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cdx1P18111 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cdx1P18111 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cdx1P18111 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdx1P18111 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdx1P18111 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.24□□□□□ -0.61
Cdx1P18111 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cdx1P18111 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cdx1P18111 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.23□□□□□ -0.61
Cdx1P18111 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Gm18489-201ENSMUST00000172565 551 ntBASIC11.23□□□□□ -0.61
Cdx1P18111 Gm4899-201ENSMUST00000178708 719 ntBASIC11.23□□□□□ -0.61
Cdx1P18111 Gm27300-201ENSMUST00000184085 97 ntBASIC11.23□□□□□ -0.61
Cdx1P18111 Gm27335-201ENSMUST00000184758 97 ntBASIC11.23□□□□□ -0.61
Cdx1P18111 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cdx1P18111 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.23□□□□□ -0.61
Cdx1P18111 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.23□□□□□ -0.61
Cdx1P18111 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cdx1P18111 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.23□□□□□ -0.61
Cdx1P18111 Chchd1-203ENSMUST00000224633 557 ntBASIC11.23□□□□□ -0.61
Cdx1P18111 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cdx1P18111 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Cdx1P18111 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.23□□□□□ -0.61
Cdx1P18111 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Cdx1P18111 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.23□□□□□ -0.61
Cdx1P18111 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.23□□□□□ -0.61
Cdx1P18111 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdx1P18111 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cdx1P18111 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.22□□□□□ -0.61
Cdx1P18111 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cdx1P18111 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cdx1P18111 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms