Protein–RNA interactions for Protein: P16546

Sptan1, Spectrin alpha chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1P16546 Gm18935-201ENSMUST00000212692 664 ntBASIC12.03□□□□□ -0.48
Sptan1P16546 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Sptan1P16546 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sptan1P16546 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptan1P16546 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Sptan1P16546 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptan1P16546 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sptan1P16546 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptan1P16546 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptan1P16546 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptan1P16546 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptan1P16546 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptan1P16546 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sptan1P16546 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sptan1P16546 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Sptan1P16546 Gm14381-201ENSMUST00000122105 414 ntBASIC12.02□□□□□ -0.48
Sptan1P16546 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sptan1P16546 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sptan1P16546 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sptan1P16546 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sptan1P16546 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sptan1P16546 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sptan1P16546 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.02□□□□□ -0.49
Sptan1P16546 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Sptan1P16546 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.02□□□□□ -0.49
Sptan1P16546 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.02□□□□□ -0.49
Sptan1P16546 Gm44397-201ENSMUST00000195950 113 ntBASIC12.02□□□□□ -0.49
Sptan1P16546 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Sptan1P16546 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.02□□□□□ -0.49
Sptan1P16546 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.02□□□□□ -0.49
Sptan1P16546 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.02□□□□□ -0.49
Sptan1P16546 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sptan1P16546 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptan1P16546 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sptan1P16546 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.01□□□□□ -0.49
Sptan1P16546 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.01□□□□□ -0.49
Sptan1P16546 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Gm29396-201ENSMUST00000185659 716 ntBASIC12.01□□□□□ -0.49
Sptan1P16546 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sptan1P16546 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.01□□□□□ -0.49
Sptan1P16546 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.01□□□□□ -0.49
Sptan1P16546 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.01□□□□□ -0.49
Sptan1P16546 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptan1P16546 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.01□□□□□ -0.49
Sptan1P16546 Gm13297-201ENSMUST00000120205 934 ntBASIC12.01□□□□□ -0.49
Sptan1P16546 Gm2383-201ENSMUST00000181461 807 ntBASIC12.01□□□□□ -0.49
Sptan1P16546 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms