Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ctla2aP12399 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.5□□□□□ -0.41
Ctla2aP12399 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.5□□□□□ -0.41
Ctla2aP12399 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.5□□□□□ -0.41
Ctla2aP12399 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.5□□□□□ -0.41
Ctla2aP12399 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.5□□□□□ -0.41
Ctla2aP12399 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.5□□□□□ -0.41
Ctla2aP12399 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ctla2aP12399 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ctla2aP12399 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ctla2aP12399 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.5□□□□□ -0.41
Ctla2aP12399 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.5□□□□□ -0.41
Ctla2aP12399 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ctla2aP12399 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ctla2aP12399 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.49□□□□□ -0.41
Ctla2aP12399 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ctla2aP12399 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.49□□□□□ -0.41
Ctla2aP12399 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.49□□□□□ -0.41
Ctla2aP12399 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ctla2aP12399 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ctla2aP12399 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ctla2aP12399 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ctla2aP12399 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ctla2aP12399 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.48□□□□□ -0.41
Ctla2aP12399 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ctla2aP12399 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.48□□□□□ -0.41
Ctla2aP12399 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ctla2aP12399 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.48□□□□□ -0.41
Ctla2aP12399 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Ctla2aP12399 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.48□□□□□ -0.41
Ctla2aP12399 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.48□□□□□ -0.41
Ctla2aP12399 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.48□□□□□ -0.41
Ctla2aP12399 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.48□□□□□ -0.41
Ctla2aP12399 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ctla2aP12399 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Ctla2aP12399 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ctla2aP12399 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.48□□□□□ -0.41
Ctla2aP12399 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctla2aP12399 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctla2aP12399 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctla2aP12399 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctla2aP12399 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ctla2aP12399 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms