Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Col1a1P11087 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Col1a1P11087 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col1a1P11087 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.05■□□□□ 0.16
Col1a1P11087 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col1a1P11087 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col1a1P11087 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Col1a1P11087 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col1a1P11087 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col1a1P11087 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Col1a1P11087 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col1a1P11087 Gm43579-201ENSMUST00000202387 1307 ntBASIC16.05■□□□□ 0.16
Col1a1P11087 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Col1a1P11087 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.04■□□□□ 0.16
Col1a1P11087 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col1a1P11087 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Col1a1P11087 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col1a1P11087 Gm11591-201ENSMUST00000120063 702 ntBASIC16.04■□□□□ 0.16
Col1a1P11087 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC16.04■□□□□ 0.16
Col1a1P11087 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col1a1P11087 Gm18753-201ENSMUST00000201000 566 ntBASIC16.04■□□□□ 0.16
Col1a1P11087 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Col1a1P11087 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col1a1P11087 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col1a1P11087 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.04■□□□□ 0.16
Col1a1P11087 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col1a1P11087 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col1a1P11087 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col1a1P11087 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.04■□□□□ 0.16
Col1a1P11087 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col1a1P11087 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.04■□□□□ 0.16
Col1a1P11087 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col1a1P11087 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
Col1a1P11087 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col1a1P11087 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.04■□□□□ 0.16
Col1a1P11087 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col1a1P11087 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col1a1P11087 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col1a1P11087 Gm15370-201ENSMUST00000117158 253 ntBASIC16.03■□□□□ 0.16
Col1a1P11087 Gm2231-201ENSMUST00000125661 612 ntBASIC16.03■□□□□ 0.16
Col1a1P11087 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 Gm17376-201ENSMUST00000166016 84 ntBASIC16.03■□□□□ 0.16
Col1a1P11087 Gm2383-201ENSMUST00000181461 807 ntBASIC16.03■□□□□ 0.16
Col1a1P11087 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC16.03■□□□□ 0.16
Col1a1P11087 Gm10608-202ENSMUST00000213924 676 ntBASIC16.03■□□□□ 0.16
Col1a1P11087 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Col1a1P11087 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.03■□□□□ 0.16
Col1a1P11087 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col1a1P11087 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC16.03■□□□□ 0.16
Col1a1P11087 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Col1a1P11087 Gm11637-201ENSMUST00000120601 592 ntBASIC16.03■□□□□ 0.16
Col1a1P11087 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.03■□□□□ 0.16
Col1a1P11087 Gm3890-201ENSMUST00000182416 207 ntBASIC16.03■□□□□ 0.16
Col1a1P11087 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.03■□□□□ 0.16
Col1a1P11087 Gm3786-201ENSMUST00000202659 378 ntBASIC16.03■□□□□ 0.16
Col1a1P11087 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Col1a1P11087 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col1a1P11087 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col1a1P11087 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col1a1P11087 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col1a1P11087 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col1a1P11087 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.02■□□□□ 0.16
Col1a1P11087 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Col1a1P11087 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col1a1P11087 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col1a1P11087 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col1a1P11087 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col1a1P11087 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col1a1P11087 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col1a1P11087 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col1a1P11087 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col1a1P11087 Gm37489-201ENSMUST00000191883 159 ntBASIC16.02■□□□□ 0.15
Col1a1P11087 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Col1a1P11087 Gm44069-201ENSMUST00000204898 506 ntBASIC16.02■□□□□ 0.15
Col1a1P11087 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC16.02■□□□□ 0.15
Col1a1P11087 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col1a1P11087 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.02■□□□□ 0.15
Col1a1P11087 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col1a1P11087 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col1a1P11087 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col1a1P11087 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col1a1P11087 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.02■□□□□ 0.15
Col1a1P11087 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col1a1P11087 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col1a1P11087 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms