Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hoxc6P10629 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hoxc6P10629 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hoxc6P10629 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hoxc6P10629 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.32■□□□□ 0.04
Hoxc6P10629 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Hoxc6P10629 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Hoxc6P10629 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.32■□□□□ 0.04
Hoxc6P10629 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.32■□□□□ 0.04
Hoxc6P10629 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Hoxc6P10629 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.32■□□□□ 0.04
Hoxc6P10629 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Hoxc6P10629 Gm22018-201ENSMUST00000104357 131 ntBASIC15.32■□□□□ 0.04
Hoxc6P10629 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Gm12134-201ENSMUST00000122109 520 ntBASIC15.32■□□□□ 0.04
Hoxc6P10629 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.32■□□□□ 0.04
Hoxc6P10629 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.32■□□□□ 0.04
Hoxc6P10629 Gm3961-201ENSMUST00000204425 994 ntBASIC15.32■□□□□ 0.04
Hoxc6P10629 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Hoxc6P10629 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.32■□□□□ 0.04
Hoxc6P10629 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.32■□□□□ 0.04
Hoxc6P10629 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.32■□□□□ 0.04
Hoxc6P10629 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Hoxc6P10629 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc6P10629 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Hoxc6P10629 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.31■□□□□ 0.04
Hoxc6P10629 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Gm43118-201ENSMUST00000199149 775 ntBASIC15.31■□□□□ 0.04
Hoxc6P10629 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Snora73a-201ENSMUST00000082453 205 ntBASIC15.31■□□□□ 0.04
Hoxc6P10629 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.31■□□□□ 0.04
Hoxc6P10629 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Hoxc6P10629 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Hoxc6P10629 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc6P10629 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
Hoxc6P10629 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hoxc6P10629 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc6P10629 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.3■□□□□ 0.04
Hoxc6P10629 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc6P10629 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc6P10629 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc6P10629 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Hoxc6P10629 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc6P10629 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc6P10629 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc6P10629 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc6P10629 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc6P10629 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hoxc6P10629 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Hoxc6P10629 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.3■□□□□ 0.04
Hoxc6P10629 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms