Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ly6c1P0CW02 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.65□□□□□ -0.55
Ly6c1P0CW02 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Gm7488-201ENSMUST00000117148 684 ntBASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Gm8927-201ENSMUST00000181978 981 ntBASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 CT010431.1-201ENSMUST00000221249 1080 ntBASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Gm3222-201ENSMUST00000071282 990 ntBASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ly6c1P0CW02 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Gm28760-201ENSMUST00000185995 736 ntBASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Gm29741-201ENSMUST00000192667 421 ntBASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms