Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.51□□□□□ -0.89
Smim1P0C8K7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC9.51□□□□□ -0.89
Smim1P0C8K7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Rprl3-201ENSMUST00000157400 290 ntBASIC9.51□□□□□ -0.89
Smim1P0C8K7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC9.51□□□□□ -0.89
Smim1P0C8K7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Gm30025-201ENSMUST00000218555 728 ntBASIC9.51□□□□□ -0.89
Smim1P0C8K7 AC159205.6-201ENSMUST00000224935 887 ntBASIC9.51□□□□□ -0.89
Smim1P0C8K7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC9.51□□□□□ -0.89
Smim1P0C8K7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smim1P0C8K7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Nupl1-206ENSMUST00000225111 2936 ntBASIC9.5□□□□□ -0.89
Smim1P0C8K7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Gm25745-201ENSMUST00000174945 133 ntBASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms