Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hoxc9P09633 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hoxc9P09633 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Hoxc9P09633 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Hoxc9P09633 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC17.86■□□□□ 0.45
Hoxc9P09633 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
Hoxc9P09633 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.86■□□□□ 0.45
Hoxc9P09633 CT573086.1-201ENSMUST00000227202 1074 ntBASIC17.86■□□□□ 0.45
Hoxc9P09633 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.86■□□□□ 0.45
Hoxc9P09633 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxc9P09633 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hoxc9P09633 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC17.85■□□□□ 0.45
Hoxc9P09633 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Gm15544-201ENSMUST00000118776 1531 ntBASIC17.85■□□□□ 0.45
Hoxc9P09633 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Hoxc9P09633 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC17.85■□□□□ 0.45
Hoxc9P09633 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.85■□□□□ 0.45
Hoxc9P09633 Gm7029-201ENSMUST00000173226 450 ntBASIC17.85■□□□□ 0.45
Hoxc9P09633 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.85■□□□□ 0.45
Hoxc9P09633 Gm43118-201ENSMUST00000199149 775 ntBASIC17.85■□□□□ 0.45
Hoxc9P09633 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC17.85■□□□□ 0.45
Hoxc9P09633 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.85■□□□□ 0.45
Hoxc9P09633 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hoxc9P09633 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.85■□□□□ 0.45
Hoxc9P09633 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc9P09633 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Hoxc9P09633 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC17.84■□□□□ 0.45
Hoxc9P09633 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Hoxc9P09633 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Hoxc9P09633 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC17.84■□□□□ 0.45
Hoxc9P09633 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC17.84■□□□□ 0.45
Hoxc9P09633 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC17.84■□□□□ 0.45
Hoxc9P09633 Gm26927-201ENSMUST00000182385 965 ntBASIC17.84■□□□□ 0.45
Hoxc9P09633 Gm37922-201ENSMUST00000195596 455 ntBASIC17.84■□□□□ 0.45
Hoxc9P09633 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Hoxc9P09633 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.84■□□□□ 0.45
Hoxc9P09633 Gm45930-201ENSMUST00000221330 292 ntBASIC17.84■□□□□ 0.45
Hoxc9P09633 Gm2824-203ENSMUST00000226189 1228 ntBASIC17.84■□□□□ 0.45
Hoxc9P09633 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC17.84■□□□□ 0.45
Hoxc9P09633 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Hoxc9P09633 Snora73a-201ENSMUST00000082453 205 ntBASIC17.84■□□□□ 0.45
Hoxc9P09633 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Hoxc9P09633 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Hoxc9P09633 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc9P09633 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hoxc9P09633 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hoxc9P09633 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hoxc9P09633 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hoxc9P09633 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms