Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.68□□□□□ -0.38
Col4a2P08122 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.68□□□□□ -0.38
Col4a2P08122 Gm42627-201ENSMUST00000197347 224 ntBASIC12.68□□□□□ -0.38
Col4a2P08122 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col4a2P08122 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.68□□□□□ -0.38
Col4a2P08122 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.68□□□□□ -0.38
Col4a2P08122 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a2P08122 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a2P08122 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.68□□□□□ -0.38
Col4a2P08122 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a2P08122 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a2P08122 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a2P08122 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col4a2P08122 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC12.68□□□□□ -0.38
Col4a2P08122 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.68□□□□□ -0.38
Col4a2P08122 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col4a2P08122 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a2P08122 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a2P08122 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a2P08122 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col4a2P08122 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.68□□□□□ -0.38
Col4a2P08122 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a2P08122 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Col4a2P08122 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a2P08122 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a2P08122 Gm44364-201ENSMUST00000198368 141 ntBASIC12.68□□□□□ -0.38
Col4a2P08122 Gm18935-201ENSMUST00000212692 664 ntBASIC12.68□□□□□ -0.38
Col4a2P08122 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.68□□□□□ -0.38
Col4a2P08122 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.68□□□□□ -0.38
Col4a2P08122 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Col4a2P08122 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a2P08122 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a2P08122 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a2P08122 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.67□□□□□ -0.38
Col4a2P08122 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC12.67□□□□□ -0.38
Col4a2P08122 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Col4a2P08122 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.67□□□□□ -0.38
Col4a2P08122 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Col4a2P08122 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Col4a2P08122 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.67□□□□□ -0.38
Col4a2P08122 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Gm12241-201ENSMUST00000118330 726 ntBASIC12.67□□□□□ -0.38
Col4a2P08122 Gm15808-201ENSMUST00000119046 604 ntBASIC12.67□□□□□ -0.38
Col4a2P08122 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.67□□□□□ -0.38
Col4a2P08122 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Gm6334-201ENSMUST00000207083 228 ntBASIC12.67□□□□□ -0.38
Col4a2P08122 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Col4a2P08122 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.67□□□□□ -0.38
Col4a2P08122 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a2P08122 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Col4a2P08122 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Col4a2P08122 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.66□□□□□ -0.38
Col4a2P08122 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Gm38158-201ENSMUST00000194617 339 ntBASIC12.66□□□□□ -0.38
Col4a2P08122 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.66□□□□□ -0.38
Col4a2P08122 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col4a2P08122 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col4a2P08122 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.66□□□□□ -0.38
Col4a2P08122 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col4a2P08122 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Col4a2P08122 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms