Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.37□□□□□ -0.43
P06344 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
P06344 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
P06344 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
P06344 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.37□□□□□ -0.43
P06344 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.37□□□□□ -0.43
P06344 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
P06344 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.37□□□□□ -0.43
P06344 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.37□□□□□ -0.43
P06344 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.37□□□□□ -0.43
P06344 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.37□□□□□ -0.43
P06344 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
P06344 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
P06344 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
P06344 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.37□□□□□ -0.43
P06344 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
P06344 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.37□□□□□ -0.43
P06344 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.36□□□□□ -0.43
P06344 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.36□□□□□ -0.43
P06344 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
P06344 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
P06344 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.36□□□□□ -0.43
P06344 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.36□□□□□ -0.43
P06344 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
P06344 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.36□□□□□ -0.43
P06344 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.36□□□□□ -0.43
P06344 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
P06344 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
P06344 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
P06344 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.36□□□□□ -0.43
P06344 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.36□□□□□ -0.43
P06344 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06344 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P06344 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06344 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06344 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06344 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
P06344 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.35□□□□□ -0.43
P06344 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P06344 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06344 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06344 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06344 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06344 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06344 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06344 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
P06344 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.35□□□□□ -0.43
P06344 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P06344 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.35□□□□□ -0.43
P06344 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms