Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm8793-201ENSMUST00000183069 1303 ntBASIC16.76■□□□□ 0.27
Col4a1P02463 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a1P02463 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a1P02463 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Col4a1P02463 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a1P02463 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a1P02463 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a1P02463 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Gm16202-201ENSMUST00000117532 544 ntBASIC16.75■□□□□ 0.27
Col4a1P02463 Gm11978-201ENSMUST00000122315 466 ntBASIC16.75■□□□□ 0.27
Col4a1P02463 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC16.75■□□□□ 0.27
Col4a1P02463 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Gm4857-201ENSMUST00000192718 785 ntBASIC16.75■□□□□ 0.27
Col4a1P02463 Gm6621-201ENSMUST00000193251 772 ntBASIC16.75■□□□□ 0.27
Col4a1P02463 Gm18056-201ENSMUST00000207670 568 ntBASIC16.75■□□□□ 0.27
Col4a1P02463 Gm18061-201ENSMUST00000208350 562 ntBASIC16.75■□□□□ 0.27
Col4a1P02463 Gm18063-201ENSMUST00000208529 568 ntBASIC16.75■□□□□ 0.27
Col4a1P02463 Gm18052-201ENSMUST00000208750 559 ntBASIC16.75■□□□□ 0.27
Col4a1P02463 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.75■□□□□ 0.27
Col4a1P02463 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Col4a1P02463 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Col4a1P02463 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Col4a1P02463 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Col4a1P02463 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.75■□□□□ 0.27
Col4a1P02463 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 AC096628.2-201ENSMUST00000225443 1413 ntBASIC16.75■□□□□ 0.27
Col4a1P02463 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Snord83b-201ENSMUST00000104546 94 ntBASIC16.75■□□□□ 0.27
Col4a1P02463 Gm6023-201ENSMUST00000118217 606 ntBASIC16.75■□□□□ 0.27
Col4a1P02463 Gm13342-201ENSMUST00000121055 207 ntBASIC16.75■□□□□ 0.27
Col4a1P02463 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Gm26083-201ENSMUST00000157904 193 ntBASIC16.75■□□□□ 0.27
Col4a1P02463 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Col4a1P02463 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a1P02463 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Col4a1P02463 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC16.74■□□□□ 0.27
Col4a1P02463 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.74■□□□□ 0.27
Col4a1P02463 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.74■□□□□ 0.27
Col4a1P02463 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 Gm18935-201ENSMUST00000212692 664 ntBASIC16.74■□□□□ 0.27
Col4a1P02463 Gm32025-201ENSMUST00000217960 307 ntBASIC16.74■□□□□ 0.27
Col4a1P02463 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Col4a1P02463 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a1P02463 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Col4a1P02463 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Col4a1P02463 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a1P02463 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a1P02463 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Col4a1P02463 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Col4a1P02463 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC16.73■□□□□ 0.27
Col4a1P02463 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a1P02463 Gm2991-201ENSMUST00000173338 480 ntBASIC16.73■□□□□ 0.27
Col4a1P02463 Gm28693-202ENSMUST00000190758 331 ntBASIC16.73■□□□□ 0.27
Col4a1P02463 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC16.73■□□□□ 0.27
Col4a1P02463 Gm3961-201ENSMUST00000204425 994 ntBASIC16.73■□□□□ 0.27
Col4a1P02463 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC16.73■□□□□ 0.27
Col4a1P02463 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC16.73■□□□□ 0.27
Col4a1P02463 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a1P02463 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.73■□□□□ 0.27
Col4a1P02463 Gm8227-201ENSMUST00000223306 571 ntBASIC16.73■□□□□ 0.27
Col4a1P02463 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a1P02463 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a1P02463 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a1P02463 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a1P02463 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a1P02463 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Col4a1P02463 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Col4a1P02463 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms