Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.33□□□□□ -0.28
Hcn1O88704 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Hcn1O88704 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.33□□□□□ -0.28
Hcn1O88704 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.33□□□□□ -0.28
Hcn1O88704 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.33□□□□□ -0.28
Hcn1O88704 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.33□□□□□ -0.28
Hcn1O88704 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Hcn1O88704 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hcn1O88704 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Hcn1O88704 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Hcn1O88704 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hcn1O88704 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hcn1O88704 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hcn1O88704 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hcn1O88704 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.32□□□□□ -0.28
Hcn1O88704 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Auts2-212ENSMUST00000178555 309 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hcn1O88704 Gm29310-201ENSMUST00000185468 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm21825-201ENSMUST00000185728 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm29109-201ENSMUST00000185895 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm21896-201ENSMUST00000186520 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm21873-201ENSMUST00000186728 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm21794-201ENSMUST00000187056 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm21880-201ENSMUST00000187275 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm21826-201ENSMUST00000187451 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm28630-201ENSMUST00000187806 498 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm21198-201ENSMUST00000188393 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm21749-201ENSMUST00000189343 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm21901-201ENSMUST00000189568 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm29424-201ENSMUST00000189716 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm28599-201ENSMUST00000189838 694 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm21867-201ENSMUST00000189917 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm29269-201ENSMUST00000190087 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm21722-201ENSMUST00000190153 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm28423-201ENSMUST00000190701 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm21899-201ENSMUST00000190745 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm21910-201ENSMUST00000191163 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm21849-201ENSMUST00000191571 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm28678-201ENSMUST00000191593 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm20910-201ENSMUST00000193268 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Gm21871-201ENSMUST00000194621 696 ntBASIC13.32□□□□□ -0.28
Hcn1O88704 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.32□□□□□ -0.28
Hcn1O88704 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Hcn1O88704 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Hcn1O88704 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.32□□□□□ -0.28
Hcn1O88704 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hcn1O88704 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.31□□□□□ -0.28
Hcn1O88704 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.31□□□□□ -0.28
Hcn1O88704 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms