Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cops4O88544 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cops4O88544 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cops4O88544 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.82□□□□□ -0.36
Cops4O88544 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cops4O88544 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cops4O88544 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cops4O88544 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.82□□□□□ -0.36
Cops4O88544 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.82□□□□□ -0.36
Cops4O88544 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.82□□□□□ -0.36
Cops4O88544 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.82□□□□□ -0.36
Cops4O88544 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cops4O88544 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.82□□□□□ -0.36
Cops4O88544 Thap2-203ENSMUST00000218989 527 ntBASIC12.82□□□□□ -0.36
Cops4O88544 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Cops4O88544 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cops4O88544 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.82□□□□□ -0.36
Cops4O88544 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.82□□□□□ -0.36
Cops4O88544 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops4O88544 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cops4O88544 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cops4O88544 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Gm14140-201ENSMUST00000119999 995 ntBASIC12.81□□□□□ -0.36
Cops4O88544 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.81□□□□□ -0.36
Cops4O88544 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cops4O88544 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cops4O88544 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cops4O88544 Gm27741-201ENSMUST00000185060 237 ntBASIC12.81□□□□□ -0.36
Cops4O88544 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.81□□□□□ -0.36
Cops4O88544 Gm45098-201ENSMUST00000207179 657 ntBASIC12.81□□□□□ -0.36
Cops4O88544 Gm45747-201ENSMUST00000212203 999 ntBASIC12.81□□□□□ -0.36
Cops4O88544 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.81□□□□□ -0.36
Cops4O88544 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops4O88544 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cops4O88544 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.81□□□□□ -0.36
Cops4O88544 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.81□□□□□ -0.36
Cops4O88544 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cops4O88544 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.8□□□□□ -0.36
Cops4O88544 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cops4O88544 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cops4O88544 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Cops4O88544 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Cops4O88544 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms