Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Gm10226O88253 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Gm10226O88253 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Gm10226O88253 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.68□□□□□ -0.7
Gm10226O88253 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Gm10226O88253 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.68□□□□□ -0.7
Gm10226O88253 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.68□□□□□ -0.7
Gm10226O88253 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Gm10226O88253 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.68□□□□□ -0.7
Gm10226O88253 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.68□□□□□ -0.7
Gm10226O88253 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.68□□□□□ -0.7
Gm10226O88253 Gm7653-201ENSMUST00000214567 508 ntBASIC10.68□□□□□ -0.7
Gm10226O88253 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Gm10226O88253 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Gm10226O88253 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Gm10226O88253 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10226O88253 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC10.67□□□□□ -0.7
Gm10226O88253 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.67□□□□□ -0.7
Gm10226O88253 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Gm10226O88253 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC10.67□□□□□ -0.7
Gm10226O88253 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC10.67□□□□□ -0.7
Gm10226O88253 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Gm10226O88253 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Gm10226O88253 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Gm10226O88253 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.67□□□□□ -0.7
Gm10226O88253 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Gm27701-201ENSMUST00000184498 110 ntBASIC10.67□□□□□ -0.7
Gm10226O88253 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.67□□□□□ -0.7
Gm10226O88253 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Gm10226O88253 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Gm10226O88253 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Gm10226O88253 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Gm10226O88253 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10226O88253 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10226O88253 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10226O88253 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Gm10226O88253 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10226O88253 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms