Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn2O70591 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn2O70591 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn2O70591 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn2O70591 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn2O70591 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn2O70591 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn2O70591 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn2O70591 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn2O70591 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn2O70591 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn2O70591 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn2O70591 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.62□□□□□ -0.55
Pfdn2O70591 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn2O70591 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pfdn2O70591 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pfdn2O70591 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Pfdn2O70591 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.61□□□□□ -0.55
Pfdn2O70591 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.61□□□□□ -0.55
Pfdn2O70591 Gm25116-201ENSMUST00000157191 122 ntBASIC11.61□□□□□ -0.55
Pfdn2O70591 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pfdn2O70591 Gm7230-201ENSMUST00000173026 815 ntBASIC11.61□□□□□ -0.55
Pfdn2O70591 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Gm27459-201ENSMUST00000184860 107 ntBASIC11.61□□□□□ -0.55
Pfdn2O70591 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.61□□□□□ -0.55
Pfdn2O70591 Ank2-226ENSMUST00000189368 339 ntBASIC11.61□□□□□ -0.55
Pfdn2O70591 Gm21362-201ENSMUST00000194272 928 ntBASIC11.61□□□□□ -0.55
Pfdn2O70591 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Pfdn2O70591 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.61□□□□□ -0.55
Pfdn2O70591 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pfdn2O70591 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Pfdn2O70591 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.61□□□□□ -0.55
Pfdn2O70591 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn2O70591 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.61□□□□□ -0.55
Pfdn2O70591 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pfdn2O70591 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.6□□□□□ -0.55
Pfdn2O70591 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC11.6□□□□□ -0.55
Pfdn2O70591 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.6□□□□□ -0.55
Pfdn2O70591 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.6□□□□□ -0.55
Pfdn2O70591 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Pfdn2O70591 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.6□□□□□ -0.55
Pfdn2O70591 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.6□□□□□ -0.55
Pfdn2O70591 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.6□□□□□ -0.55
Pfdn2O70591 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pfdn2O70591 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.6□□□□□ -0.55
Pfdn2O70591 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.6□□□□□ -0.55
Pfdn2O70591 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Pfdn2O70591 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn2O70591 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms