Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.72□□□□□ -0.21
Pdlim1O70400 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.72□□□□□ -0.21
Pdlim1O70400 Gm27437-201ENSMUST00000183429 107 ntBASIC13.72□□□□□ -0.21
Pdlim1O70400 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.72□□□□□ -0.21
Pdlim1O70400 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim1O70400 Gm9797-201ENSMUST00000052902 613 ntBASIC13.72□□□□□ -0.21
Pdlim1O70400 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim1O70400 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim1O70400 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pdlim1O70400 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim1O70400 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim1O70400 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.71□□□□□ -0.21
Pdlim1O70400 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.71□□□□□ -0.21
Pdlim1O70400 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.71□□□□□ -0.21
Pdlim1O70400 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Pdlim1O70400 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.71□□□□□ -0.21
Pdlim1O70400 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Pdlim1O70400 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.71□□□□□ -0.21
Pdlim1O70400 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Pdlim1O70400 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Gm16215-201ENSMUST00000161990 637 ntBASIC13.71□□□□□ -0.21
Pdlim1O70400 Gm27772-201ENSMUST00000184900 187 ntBASIC13.71□□□□□ -0.21
Pdlim1O70400 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.71□□□□□ -0.21
Pdlim1O70400 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pdlim1O70400 Gm17795-201ENSMUST00000214505 757 ntBASIC13.71□□□□□ -0.21
Pdlim1O70400 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.71□□□□□ -0.21
Pdlim1O70400 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.71□□□□□ -0.21
Pdlim1O70400 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim1O70400 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim1O70400 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim1O70400 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim1O70400 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim1O70400 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim1O70400 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim1O70400 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim1O70400 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pdlim1O70400 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.7□□□□□ -0.22
Pdlim1O70400 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.7□□□□□ -0.22
Pdlim1O70400 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.7□□□□□ -0.22
Pdlim1O70400 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pdlim1O70400 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Pdlim1O70400 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.7□□□□□ -0.22
Pdlim1O70400 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pdlim1O70400 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.7□□□□□ -0.22
Pdlim1O70400 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.7□□□□□ -0.22
Pdlim1O70400 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.7□□□□□ -0.22
Pdlim1O70400 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.7□□□□□ -0.22
Pdlim1O70400 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.7□□□□□ -0.22
Pdlim1O70400 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pdlim1O70400 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim1O70400 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pdlim1O70400 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms