Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Pde6dO55057 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Pde6dO55057 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Pde6dO55057 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC10.94□□□□□ -0.66
Pde6dO55057 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
Pde6dO55057 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.94□□□□□ -0.66
Pde6dO55057 Gm37584-201ENSMUST00000193595 1290 ntBASIC10.94□□□□□ -0.66
Pde6dO55057 Gm45098-201ENSMUST00000207179 657 ntBASIC10.94□□□□□ -0.66
Pde6dO55057 Gm18246-201ENSMUST00000221023 728 ntBASIC10.94□□□□□ -0.66
Pde6dO55057 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pde6dO55057 AC025913.2-201ENSMUST00000220136 1766 ntBASIC10.94□□□□□ -0.66
Pde6dO55057 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.94□□□□□ -0.66
Pde6dO55057 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Pde6dO55057 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Pde6dO55057 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pde6dO55057 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.94□□□□□ -0.66
Pde6dO55057 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Pde6dO55057 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pde6dO55057 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pde6dO55057 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pde6dO55057 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.94□□□□□ -0.66
Pde6dO55057 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Pde6dO55057 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.93□□□□□ -0.66
Pde6dO55057 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Pde6dO55057 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pde6dO55057 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.93□□□□□ -0.66
Pde6dO55057 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Gm11780-201ENSMUST00000136880 516 ntBASIC10.93□□□□□ -0.66
Pde6dO55057 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Pde6dO55057 Gm2445-201ENSMUST00000182798 989 ntBASIC10.93□□□□□ -0.66
Pde6dO55057 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC10.93□□□□□ -0.66
Pde6dO55057 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC10.93□□□□□ -0.66
Pde6dO55057 AC153889.1-201ENSMUST00000219257 330 ntBASIC10.93□□□□□ -0.66
Pde6dO55057 AC154757.1-201ENSMUST00000228289 336 ntBASIC10.93□□□□□ -0.66
Pde6dO55057 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Pde6dO55057 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Pde6dO55057 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.93□□□□□ -0.66
Pde6dO55057 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pde6dO55057 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pde6dO55057 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pde6dO55057 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Pde6dO55057 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pde6dO55057 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms