Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Gm11918-201ENSMUST00000121660 179 ntBASIC14.39□□□□□ -0.11
Cldn5O54942 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.39□□□□□ -0.11
Cldn5O54942 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Mir7654-201ENSMUST00000185082 70 ntBASIC14.39□□□□□ -0.11
Cldn5O54942 Gm19078-201ENSMUST00000206311 727 ntBASIC14.39□□□□□ -0.11
Cldn5O54942 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.39□□□□□ -0.11
Cldn5O54942 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.39□□□□□ -0.11
Cldn5O54942 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.39□□□□□ -0.11
Cldn5O54942 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.39□□□□□ -0.11
Cldn5O54942 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cldn5O54942 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cldn5O54942 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cldn5O54942 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cldn5O54942 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.39□□□□□ -0.11
Cldn5O54942 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.38□□□□□ -0.11
Cldn5O54942 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Cldn5O54942 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.38□□□□□ -0.11
Cldn5O54942 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Gm18307-201ENSMUST00000206864 949 ntBASIC14.38□□□□□ -0.11
Cldn5O54942 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.38□□□□□ -0.11
Cldn5O54942 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Cldn5O54942 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cldn5O54942 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cldn5O54942 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Cldn5O54942 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn5O54942 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.37□□□□□ -0.11
Cldn5O54942 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.37□□□□□ -0.11
Cldn5O54942 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.37□□□□□ -0.11
Cldn5O54942 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.37□□□□□ -0.11
Cldn5O54942 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Cldn5O54942 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cldn5O54942 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.37□□□□□ -0.11
Cldn5O54942 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.37□□□□□ -0.11
Cldn5O54942 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cldn5O54942 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms