Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.5■□□□□ 0.23
Smarce1O54941 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.5■□□□□ 0.23
Smarce1O54941 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.5■□□□□ 0.23
Smarce1O54941 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarce1O54941 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarce1O54941 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Smarce1O54941 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.5■□□□□ 0.23
Smarce1O54941 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarce1O54941 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Smarce1O54941 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarce1O54941 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarce1O54941 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Smarce1O54941 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.5■□□□□ 0.23
Smarce1O54941 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarce1O54941 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarce1O54941 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarce1O54941 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarce1O54941 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarce1O54941 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Smarce1O54941 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.49■□□□□ 0.23
Smarce1O54941 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Smarce1O54941 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Smarce1O54941 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.49■□□□□ 0.23
Smarce1O54941 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.49■□□□□ 0.23
Smarce1O54941 Gm18889-201ENSMUST00000174284 929 ntBASIC16.49■□□□□ 0.23
Smarce1O54941 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.49■□□□□ 0.23
Smarce1O54941 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.49■□□□□ 0.23
Smarce1O54941 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.49■□□□□ 0.23
Smarce1O54941 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarce1O54941 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.48■□□□□ 0.23
Smarce1O54941 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Smarce1O54941 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Gm25287-201ENSMUST00000103846 110 ntBASIC16.48■□□□□ 0.23
Smarce1O54941 Gm22918-201ENSMUST00000103855 110 ntBASIC16.48■□□□□ 0.23
Smarce1O54941 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.48■□□□□ 0.23
Smarce1O54941 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.48■□□□□ 0.23
Smarce1O54941 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.48■□□□□ 0.23
Smarce1O54941 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Smarce1O54941 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.48■□□□□ 0.23
Smarce1O54941 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Smarce1O54941 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Smarce1O54941 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Smarce1O54941 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Smarce1O54941 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
Smarce1O54941 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarce1O54941 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Smarce1O54941 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Smarce1O54941 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Smarce1O54941 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Smarce1O54941 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Smarce1O54941 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.47■□□□□ 0.23
Smarce1O54941 Gm13015-201ENSMUST00000118674 204 ntBASIC16.47■□□□□ 0.23
Smarce1O54941 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms