Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Dkk1O54908 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
Dkk1O54908 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Dkk1O54908 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Dkk1O54908 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Dkk1O54908 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.67□□□□□ -0.38
Dkk1O54908 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Dkk1O54908 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Dkk1O54908 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Dkk1O54908 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Gm7416-201ENSMUST00000117448 1487 ntBASIC12.67□□□□□ -0.38
Dkk1O54908 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Dkk1O54908 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Dkk1O54908 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.67□□□□□ -0.38
Dkk1O54908 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Gm13754-201ENSMUST00000120486 998 ntBASIC12.67□□□□□ -0.38
Dkk1O54908 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC12.67□□□□□ -0.38
Dkk1O54908 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.67□□□□□ -0.38
Dkk1O54908 Gm7211-201ENSMUST00000172692 1118 ntBASIC12.67□□□□□ -0.38
Dkk1O54908 Gm3052-201ENSMUST00000186409 829 ntBASIC12.67□□□□□ -0.38
Dkk1O54908 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC12.67□□□□□ -0.38
Dkk1O54908 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Dkk1O54908 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Dkk1O54908 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Dkk1O54908 Gm44212-201ENSMUST00000205016 897 ntBASIC12.67□□□□□ -0.38
Dkk1O54908 Gm44837-201ENSMUST00000206863 717 ntBASIC12.67□□□□□ -0.38
Dkk1O54908 AC144733.1-201ENSMUST00000222893 1289 ntBASIC12.67□□□□□ -0.38
Dkk1O54908 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.67□□□□□ -0.38
Dkk1O54908 AC162857.1-201ENSMUST00000226614 400 ntBASIC12.67□□□□□ -0.38
Dkk1O54908 AC121912.1-201ENSMUST00000227525 1201 ntBASIC12.67□□□□□ -0.38
Dkk1O54908 AC134414.1-201ENSMUST00000228499 1221 ntBASIC12.67□□□□□ -0.38
Dkk1O54908 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Dkk1O54908 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Vmn1r201-201ENSMUST00000091730 903 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Dkk1O54908 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
Dkk1O54908 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Dkk1O54908 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Dkk1O54908 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.67□□□□□ -0.38
Dkk1O54908 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Dkk1O54908 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.67□□□□□ -0.38
Dkk1O54908 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.67□□□□□ -0.38
Dkk1O54908 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Dkk1O54908 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Dkk1O54908 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.66□□□□□ -0.38
Dkk1O54908 Gm6973-201ENSMUST00000117080 721 ntBASIC12.66□□□□□ -0.38
Dkk1O54908 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.66□□□□□ -0.38
Dkk1O54908 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.66□□□□□ -0.38
Dkk1O54908 Gm15030-201ENSMUST00000119804 484 ntBASIC12.66□□□□□ -0.38
Dkk1O54908 Gm15483-201ENSMUST00000120338 456 ntBASIC12.66□□□□□ -0.38
Dkk1O54908 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.66□□□□□ -0.38
Dkk1O54908 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.66□□□□□ -0.38
Dkk1O54908 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.66□□□□□ -0.38
Dkk1O54908 Gm23760-201ENSMUST00000158350 116 ntBASIC12.66□□□□□ -0.38
Dkk1O54908 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.66□□□□□ -0.38
Dkk1O54908 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC12.66□□□□□ -0.38
Dkk1O54908 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.66□□□□□ -0.38
Dkk1O54908 Gm2451-201ENSMUST00000199447 999 ntBASIC12.66□□□□□ -0.38
Dkk1O54908 Gm10290-201ENSMUST00000200451 999 ntBASIC12.66□□□□□ -0.38
Dkk1O54908 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.66□□□□□ -0.38
Dkk1O54908 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC12.66□□□□□ -0.38
Dkk1O54908 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.66□□□□□ -0.38
Dkk1O54908 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.66□□□□□ -0.38
Dkk1O54908 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.66□□□□□ -0.38
Dkk1O54908 AC154724.1-201ENSMUST00000225782 821 ntBASIC12.66□□□□□ -0.38
Dkk1O54908 Gm5087-204ENSMUST00000225820 645 ntBASIC12.66□□□□□ -0.38
Dkk1O54908 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.66□□□□□ -0.38
Dkk1O54908 Olfr1120-201ENSMUST00000058737 1018 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Dkk1O54908 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Dkk1O54908 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Dkk1O54908 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Dkk1O54908 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms