Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gm21794-201ENSMUST00000187056 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm21880-201ENSMUST00000187275 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm21826-201ENSMUST00000187451 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm21198-201ENSMUST00000188393 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm21749-201ENSMUST00000189343 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm21901-201ENSMUST00000189568 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm29424-201ENSMUST00000189716 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm28599-201ENSMUST00000189838 694 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm21867-201ENSMUST00000189917 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm29269-201ENSMUST00000190087 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm21722-201ENSMUST00000190153 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm28423-201ENSMUST00000190701 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm21899-201ENSMUST00000190745 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm21910-201ENSMUST00000191163 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm21849-201ENSMUST00000191571 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm28678-201ENSMUST00000191593 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm20910-201ENSMUST00000193268 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Gm21871-201ENSMUST00000194621 696 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.68□□□□□ -0.22
Slc1a6O35544 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Slc1a6O35544 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc1a6O35544 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc1a6O35544 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc1a6O35544 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Slc1a6O35544 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc1a6O35544 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc1a6O35544 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc1a6O35544 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc1a6O35544 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc1a6O35544 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc1a6O35544 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc1a6O35544 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.68□□□□□ -0.22
Slc1a6O35544 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.67□□□□□ -0.22
Slc1a6O35544 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Slc1a6O35544 AA619741-201ENSMUST00000195095 646 ntBASIC13.67□□□□□ -0.22
Slc1a6O35544 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.67□□□□□ -0.22
Slc1a6O35544 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Slc1a6O35544 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Slc1a6O35544 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.67□□□□□ -0.22
Slc1a6O35544 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Slc1a6O35544 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc1a6O35544 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Slc1a6O35544 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Slc1a6O35544 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.66□□□□□ -0.22
Slc1a6O35544 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.66□□□□□ -0.22
Slc1a6O35544 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Slc1a6O35544 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.66□□□□□ -0.22
Slc1a6O35544 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.66□□□□□ -0.22
Slc1a6O35544 Gm2651-201ENSMUST00000203560 838 ntBASIC13.66□□□□□ -0.22
Slc1a6O35544 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.66□□□□□ -0.22
Slc1a6O35544 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Slc1a6O35544 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.66□□□□□ -0.22
Slc1a6O35544 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.66□□□□□ -0.22
Slc1a6O35544 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Slc1a6O35544 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a6O35544 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms