Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Polr1aO35134 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Polr1aO35134 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Polr1aO35134 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Polr1aO35134 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Polr1aO35134 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Polr1aO35134 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Polr1aO35134 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC20.95■□□□□ 0.94
Polr1aO35134 Gm37489-201ENSMUST00000191883 159 ntBASIC20.95■□□□□ 0.94
Polr1aO35134 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Polr1aO35134 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Polr1aO35134 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Polr1aO35134 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Polr1aO35134 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Polr1aO35134 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Polr1aO35134 Gm11222-201ENSMUST00000119005 738 ntBASIC20.95■□□□□ 0.94
Polr1aO35134 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC20.95■□□□□ 0.94
Polr1aO35134 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC20.95■□□□□ 0.94
Polr1aO35134 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Polr1aO35134 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC20.95■□□□□ 0.94
Polr1aO35134 Gm17376-201ENSMUST00000166016 84 ntBASIC20.95■□□□□ 0.94
Polr1aO35134 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Polr1aO35134 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Polr1aO35134 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Polr1aO35134 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Polr1aO35134 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Polr1aO35134 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Polr1aO35134 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Polr1aO35134 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Polr1aO35134 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Polr1aO35134 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Polr1aO35134 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Polr1aO35134 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Polr1aO35134 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Polr1aO35134 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Polr1aO35134 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Polr1aO35134 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC20.94■□□□□ 0.94
Polr1aO35134 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Polr1aO35134 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Polr1aO35134 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC20.94■□□□□ 0.94
Polr1aO35134 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Polr1aO35134 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Polr1aO35134 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC20.94■□□□□ 0.94
Polr1aO35134 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC20.94■□□□□ 0.94
Polr1aO35134 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Polr1aO35134 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Polr1aO35134 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC20.94■□□□□ 0.94
Polr1aO35134 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Polr1aO35134 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Polr1aO35134 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Polr1aO35134 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC20.93■□□□□ 0.94
Polr1aO35134 Gm7118-201ENSMUST00000200167 1003 ntBASIC20.93■□□□□ 0.94
Polr1aO35134 Gm18584-201ENSMUST00000203098 964 ntBASIC20.93■□□□□ 0.94
Polr1aO35134 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Polr1aO35134 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Polr1aO35134 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Polr1aO35134 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Polr1aO35134 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Polr1aO35134 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Polr1aO35134 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Polr1aO35134 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Polr1aO35134 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Polr1aO35134 Nupl1-207ENSMUST00000225311 2475 ntBASIC20.93■□□□□ 0.94
Polr1aO35134 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC20.92■□□□□ 0.94
Polr1aO35134 Mir7070-201ENSMUST00000183657 86 ntBASIC20.92■□□□□ 0.94
Polr1aO35134 Gm10608-202ENSMUST00000213924 676 ntBASIC20.92■□□□□ 0.94
Polr1aO35134 AC122371.3-201ENSMUST00000223402 1061 ntBASIC20.92■□□□□ 0.94
Polr1aO35134 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Polr1aO35134 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC20.92■□□□□ 0.94
Polr1aO35134 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Polr1aO35134 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Polr1aO35134 Gm45504-201ENSMUST00000211407 2107 ntBASIC20.92■□□□□ 0.94
Polr1aO35134 Gm26513-201ENSMUST00000181802 2489 ntBASIC20.92■□□□□ 0.94
Polr1aO35134 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Polr1aO35134 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Polr1aO35134 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Polr1aO35134 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Polr1aO35134 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Polr1aO35134 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Polr1aO35134 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Polr1aO35134 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Polr1aO35134 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC20.92■□□□□ 0.94
Polr1aO35134 Mospd4-201ENSMUST00000180618 576 ntBASIC20.92■□□□□ 0.94
Polr1aO35134 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Polr1aO35134 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC20.92■□□□□ 0.94
Polr1aO35134 AC093022.1-201ENSMUST00000226949 1072 ntBASIC20.92■□□□□ 0.94
Polr1aO35134 Morn2-202ENSMUST00000227729 656 ntBASIC20.92■□□□□ 0.94
Polr1aO35134 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Polr1aO35134 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Polr1aO35134 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Polr1aO35134 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Polr1aO35134 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Polr1aO35134 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Polr1aO35134 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Polr1aO35134 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Polr1aO35134 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Polr1aO35134 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Polr1aO35134 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Polr1aO35134 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Polr1aO35134 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms