Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufb11O09111 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufb11O09111 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.07□□□□□ -0.64
Ndufb11O09111 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ndufb11O09111 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.07□□□□□ -0.64
Ndufb11O09111 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufb11O09111 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufb11O09111 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufb11O09111 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufb11O09111 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ndufb11O09111 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufb11O09111 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufb11O09111 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufb11O09111 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufb11O09111 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufb11O09111 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufb11O09111 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufb11O09111 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ndufb11O09111 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufb11O09111 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufb11O09111 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufb11O09111 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ndufb11O09111 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ndufb11O09111 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.06□□□□□ -0.64
Ndufb11O09111 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.06□□□□□ -0.64
Ndufb11O09111 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.06□□□□□ -0.64
Ndufb11O09111 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.06□□□□□ -0.64
Ndufb11O09111 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ndufb11O09111 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ndufb11O09111 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.06□□□□□ -0.64
Ndufb11O09111 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ndufb11O09111 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ndufb11O09111 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.05□□□□□ -0.64
Ndufb11O09111 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.05□□□□□ -0.64
Ndufb11O09111 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Ndufb11O09111 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.05□□□□□ -0.64
Ndufb11O09111 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.05□□□□□ -0.64
Ndufb11O09111 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.05□□□□□ -0.64
Ndufb11O09111 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.05□□□□□ -0.64
Ndufb11O09111 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ndufb11O09111 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms