Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1aO08602 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1aO08602 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Raet1aO08602 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Raet1aO08602 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1aO08602 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1aO08602 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Raet1aO08602 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Raet1aO08602 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1aO08602 Gm15460-201ENSMUST00000118147 391 ntBASIC12.33□□□□□ -0.44
Raet1aO08602 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.33□□□□□ -0.44
Raet1aO08602 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.33□□□□□ -0.44
Raet1aO08602 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.33□□□□□ -0.44
Raet1aO08602 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.33□□□□□ -0.44
Raet1aO08602 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Raet1aO08602 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1aO08602 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Raet1aO08602 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1aO08602 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1aO08602 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.33□□□□□ -0.44
Raet1aO08602 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1aO08602 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.33□□□□□ -0.44
Raet1aO08602 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.33□□□□□ -0.44
Raet1aO08602 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1aO08602 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1aO08602 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Raet1aO08602 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1aO08602 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.32□□□□□ -0.44
Raet1aO08602 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.32□□□□□ -0.44
Raet1aO08602 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.32□□□□□ -0.44
Raet1aO08602 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.32□□□□□ -0.44
Raet1aO08602 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.32□□□□□ -0.44
Raet1aO08602 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Raet1aO08602 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Raet1aO08602 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Gm6888-201ENSMUST00000221983 706 ntBASIC12.32□□□□□ -0.44
Raet1aO08602 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Raet1aO08602 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Raet1aO08602 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.32□□□□□ -0.44
Raet1aO08602 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1aO08602 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Raet1aO08602 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.31□□□□□ -0.44
Raet1aO08602 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Raet1aO08602 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.31□□□□□ -0.44
Raet1aO08602 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Raet1aO08602 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.31□□□□□ -0.44
Raet1aO08602 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.31□□□□□ -0.44
Raet1aO08602 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Gm17837-201ENSMUST00000186435 985 ntBASIC12.31□□□□□ -0.44
Raet1aO08602 Gm44344-201ENSMUST00000200287 129 ntBASIC12.31□□□□□ -0.44
Raet1aO08602 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.31□□□□□ -0.44
Raet1aO08602 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1aO08602 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Raet1aO08602 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Raet1aO08602 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Raet1aO08602 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms