Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Gm9385-201ENSMUST00000117563 472 ntBASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Gm11594-201ENSMUST00000122313 162 ntBASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Gm27301-201ENSMUST00000184012 127 ntBASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Gm2272-201ENSMUST00000194903 582 ntBASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.1□□□□□ -0.47
Cldn20G5E8X0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn20G5E8X0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Gm4995-201ENSMUST00000117247 432 ntBASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Gm17271-201ENSMUST00000165535 355 ntBASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.09□□□□□ -0.47
Cldn20G5E8X0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cldn20G5E8X0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.47
Cldn20G5E8X0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cldn20G5E8X0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cldn20G5E8X0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
Cldn20G5E8X0 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cldn20G5E8X0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn20G5E8X0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms