Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Mir770-201ENSMUST00000103252 94 ntBASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Gm8344-201ENSMUST00000119813 856 ntBASIC14.24□□□□□ -0.13
Trim55G3X8Y1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Mir3081-201ENSMUST00000175305 84 ntBASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Gm27357-201ENSMUST00000183754 135 ntBASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Gm27742-201ENSMUST00000184667 60 ntBASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Gm45328-201ENSMUST00000210942 917 ntBASIC14.23□□□□□ -0.13
Trim55G3X8Y1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim55G3X8Y1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Gm7153-201ENSMUST00000117092 455 ntBASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms