Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Gm5566-201ENSMUST00000116118 459 ntBASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Gm25925-201ENSMUST00000158314 306 ntBASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Gm29541-201ENSMUST00000191351 678 ntBASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Gm44719-201ENSMUST00000206404 149 ntBASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdh9F8VPK8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh9F8VPK8 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Gm26308-201ENSMUST00000157768 69 ntBASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms