Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Mir8117-201ENSMUST00000184773 107 ntBASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 BC001981-202ENSMUST00000191393 1545 ntBASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Gm15427-201ENSMUST00000117288 531 ntBASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Gm11543-201ENSMUST00000120758 370 ntBASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh1F7BJK1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms