Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Gm5866-201ENSMUST00000177881 973 ntBASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh11xF6ZNL5 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Pcdh11xF6ZNL5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh11xF6ZNL5 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh11xF6ZNL5 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Pcdh11xF6ZNL5 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh11xF6ZNL5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh11xF6ZNL5 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Gm15393-201ENSMUST00000120499 219 ntBASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Gm10766-202ENSMUST00000194123 606 ntBASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Matn2-206ENSMUST00000228570 2798 ntBASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh11xF6ZNL5 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Gm13385-201ENSMUST00000121089 220 ntBASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh11xF6ZNL5 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms